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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945914.1_cds_XP_016488244.1_78893
CDS Infomation

[gene=LOC107808252] [db_xref=GeneID:107808252] [protein=calcium homeostasis endoplasmic reticulum protein-like] [protein_id=XP_016488244.1] [location=complement(join(69737..70485,70616..70892,73278..74276))] [gbkey=CDS]
Sequence

ATGGATCGACAAGCTCATGATTATACTGCTATGACTTTTGCTCAGCAGCAGCACCAAGCA
GCTAGCATGCAACAGCAACAACAGTTTGGTTTTCATCCCCAGCATCAACAATTTCCTCCT
TCAGTTCATGGTCCTCCATTTCTACCCCCACATTCTTCCCTTCAACAGTTCCCTTACCCT
CGCCCCATTCAGCAACCACAACTCCATCCACATACACCGCCTCCTCACCTTCTTCACCTT
CAGCAGCAACAGCAGCCGCCTCCTGCGTTTCCTCCACATATGCCTCCTCACTATGCACCG
TCACCTTTCCACAATCCCTATGATTCTCCCCCTCCTCTAGCTCCCCCACCATCTGATCCC
GAACTCCAAAAACGTATTGATAAATTAATAGAGTATGCTGTCAAAAATGGTCCCGAGTTT
GAAGCAATGATCCGCGAAAAACAGCAAGATAATCCAGCTTACAGTTTCCTCTTTGGTGGT
GAAGGCCATTACTACTACCGCTATAAACTTTGGATGTCTACTCGCCCACCTGGTGGACTG
TTTAATGCTCCTTTTCCATCCTCTTCTTTGCCTATGATGCATCCACCAAATCCTATGATG
AGCCAATCACCTTTAAATCCCACATATAGCGGCTCAAATACCGCTGCTGGGGCTTCTGCT
GCAATGTTGGGTCCACCTCATTTACATCAACCTCCTTTGCCGCCATTCTTTGAACAGCAG
CCCTCTCAGGCTTTTGGCCGCCCAGATTATGATCATTCATATAGGTCTTTCAAAGGTTTA
TCAAGGCCTCTTCCATCAGATGTTGAAATGGAATTGAATAATGTACTAAACATTCTTAAT
GGTACCAAAGAGTCAATTAAAGGTGCAAAGAGTTGGTTCATGCAGAGGTCTCCACTTATA
CCTGCTTTGGCTGAGGCAATCAGAGATAGGGTATTTTCTGTAGATGATCCTGAGAGACAG
CTGCATATTGTCTATCTTGCCAATGACATCCTATTCGAGNNNNNNNNNNNNCGAATCAAT
CCGCATGAGCTTGACAATGAGGCACTTGCTTTTAAGCCTGTTTTGGGTCCCATGCTTGCG
AGGATATATCACAATCCTCAAAACAAGGAAGAAAATCAGTCTCGGCTGCAGAAAATTTTA
CAGTTTTGGGGCTCCAAGGAAGTCTATGATCAGGATACAATTCGTGCACTTGAAAATGAG
ATGATGAGTGGGCTGCCTTCAAATTTTGCTGGTCCTCAAAGGGAACTACTGGCTGCAGAT
CCTTCTGTTGCTGCAGGATTGTCACACCAGGTAGCATACCAGAGTGCTTTACAGTGGAAG
CCTGACGAGCAGGTGCTTCCAATGCCTAATCTAGCCAATCAAGATAAAGCAGTTCCTCCA
ATGCCATCTGCGGCAGCACATCAATTTCATCCTGGTGTAGTTCCACCCACTGGGTTTCCT
GGGTTGATGCCTGTGCCGTCCTCTGTTCCACAAGGAAATCTACAAGCTGCAGGTCATCCC
ATGCCAGCATCAACTGCAAATGTAGGCGTAAAGTTGCCTCCATACCCATTGTTTCCTCCT
GGTCTTATTCCTGGTATGGTCAGGAAGATGCAGATTGGTAGTGGGGTGCCTTACTCTCCC
ATGAGCCCTTTGGATATCCCCACCGTTATACCACCCTCCACCGTGTCGGAGTCTGAGATT
CTGGAGAGTGTGTCCAAATTTTTTAGGGAGATTGGAGAAGTTAATCCATCAGAAGGTCCT
GTTAAACCATCTGATTCAGCCAATGATTATGACGACCATGAGAGAGAGCCTCCTGTTCGT
AAGGGAGGTGCTTGCATCCCTCCGCCTCTGAATCTCCAAATTGACCCTGAAACTGGGACT
GGAAGTGTAGAGCAAAAACCTGGATTGAATAGCTCCGCGCGGTTAGGACTTGGAGCCACA
GCTAATCCAAATGAGTCGAGTCAATATGATGATGTTTACTCTTCCTACAGAAACGAAAGA
AGCACCAATTACCATTCATCAATCAGTGCAAGAGCTACGAGGTAA

Peptide Sequence

PEP ID

XP_016488244.1
PEP Infomation

PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Nicotiana tabacum]
Sequence

MDRQAHDYTAMTFAQQQHQAASMQQQQQFGFHPQHQQFPPSVHGPPFLPPHSSLQQFPYP
RPIQQPQLHPHTPPPHLLHLQQQQQPPPAFPPHMPPHYAPSPFHNPYDSPPPLAPPPSDP
ELQKRIDKLIEYAVKNGPEFEAMIREKQQDNPAYSFLFGGEGHYYYRYKLWMSTRPPGGL
FNAPFPSSSLPMMHPPNPMMSQSPLNPTYSGSNTAAGASAAMLGPPHLHQPPLPPFFEQQ
PSQAFGRPDYDHSYRSFKGLSRPLPSDVEMELNNVLNILNGTKESIKGAKSWFMQRSPLI
PALAEAIRDRVFSVDDPERQLHIVYLANDILFEXXXXRINPHELDNEALAFKPVLGPMLA
RIYHNPQNKEENQSRLQKILQFWGSKEVYDQDTIRALENEMMSGLPSNFAGPQRELLAAD
PSVAAGLSHQVAYQSALQWKPDEQVLPMPNLANQDKAVPPMPSAAAHQFHPGVVPPTGFP
GLMPVPSSVPQGNLQAAGHPMPASTANVGVKLPPYPLFPPGLIPGMVRKMQIGSGVPYSP
MSPLDIPTVIPPSTVSESEILESVSKFFREIGEVNPSEGPVKPSDSANDYDDHEREPPVR
KGGACIPPPLNLQIDPETGTGSVEQKPGLNSSARLGLGATANPNESSQYDDVYSSYRNER
STNYHSSISARATR

Transcript Sequence

Gene sequence data has not been registered.